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Preprints

• Xiaoqing Wang, Sebastian Rosenzweig, Nick Scholand, H.Christian M.Holme, Martin Uecker. Model-based Reconstruction for Simultaneous Multi-slice T1 Mapping using Single-shot Inversion-recovery Radial FLASH, submitted, arXiv:1909.10633 [physics.med-ph]
• Sebastian Rosenzweig, Nick Scholand, H. Christian M. Holme, Martin Uecker. Cardiac and Respiratory Self-Gating in Radial MRI using an Adapted Singular Spectrum Analysis (SSA-FARI), submitted, arXiv:1812.09057 [physics.med-ph]

Journal Publications

• Frank Ong, Martin Uecker, Michael Lustig. Accelerating Non-Cartesian MRI Reconstruction Convergence using k-space Preconditioning. IEEE Transactions on Medical Imaging, in press. 10.1109/TMI.2019.2954121 arXiv:1902.09657 [physics.med-ph]
  Keywords: MRI, Iterative Reconstruction, Non-Cartesian, Preconditioner, Density Compensation
• Volkert Roeloffs, Martin Uecker, Jens Frahm. Joint T1 and T2 Mapping with Tiny Dictionaries and Subspace-Constrained Reconstruction. IEEE Transactions on Medical Imaging, in press. 10.1109/TMI.2019.2939130 arXiv:1812.09560 [physics.med-ph] [source code]
  Keywords: subspace reconstruction, multi-parametric mapping, T1 mapping, T2 mapping, model-based, dictionary, quantitative MRI
• Xiaoqing Wang, Florian Kohler, Christina Unterberg-Buchwald, Joachim Lotz, Jens Frahm, Martin Uecker. Model-based myocardial T1 mapping with sparsity constraints using single-shot inversion-recovery radial FLASH cardiovascular magnetic resonance. Journal of Cardiovascular Magnetic Resonance 21:60 (2019) [open access] PMC6751613 [data] [source code]
  Keywords: model-based reconstruction, myocardial T1 mapping, sparsity constraints, radial FLASH
• Jens Frahm, Dirk Voit, Martin Uecker. Real-Time Magnetic Resonance Imaging: Radial Gradient-Echo Sequences With Nonlinear Inverse Reconstruction. Investigative Radiology 54:757-766 (2019) [open access]
  Keywords: real-time MRI, radial sampling, data undersampling, iterative reconstruction, nonlinear inverse problem, Gauss-Newton method
• Ali Seif Amir Hosseini, Johannes Uhlig, Ulrike Streit, Annemarie Uhlig, Thilo Sprenger, Edris Wedi, Volker Ellenrieder, Michael Ghadimi, Martin Uecker, Dirk Voit, Jens Frahm, Joachim Lotz, Lorenz Biggemann. Hiatal hernias in patients with GERD-like symptoms: evaluation of dynamic real-time MRI vs endoscopy. European Radiology 29:6653-6661 (2019)
  Keywords: Hiatal hernia, Gastroesophageal reflux disease, Magnetic resonance imaging, Endoscopy, EDG
• Zhengguo Tan, Dirk Voit, Jost Kollmeier, Martin Uecker, Jens Frahm. Dynamic Water/Fat Separation and B0 Inhomogeneity Mapping -- Joint Estimation Using Undersampled Triple-Echo Multi-Spoke Radial FLASH. Magnetic Resonance in Medicine 82:1000-1011 (2019)
  Keywords: nonlinear inversion, model-based reconstruction, water/fat separation, off-resonance, radial MRI, real-time MRI
• Ali Seif Amir Hosseini, Johannes Uhlig, Ulrike Streit, Dirk Voit, Annemarie Uhlig, Volkert Ellenrieder, Michael Ghadimi, Thilo Sprenger, Alexander Beham, Martin Uecker, Jens Frahm, Joachim Lotz, Lorenz Biggemann. Real-time MRI for the dynamic assessment of fundoplication failure in patients with gastroesophageal reflux disease. European Radiology 29:4691-4698 (2019)
  Keywords: magnetic resonance imaging, gastroesophageal reflux disease (GERD), fundoplication
• H. Christian M. Holme, Sebastian Rosenzweig, Frank Ong, Robin N. Wilke, Michael Lustig, Martin Uecker. ENLIVE: An Efficient Nonlinear Method for Calibrationless and Robust Parallel Imaging. Scientific Reports 9:3034 (2019) [open access] PMC6395635 arXiv:1706.09780 [physics.med-ph] [source code]
  Keywords: magnetic resonance imaging, parallel imaging, ESPIRiT, iterative reconstruction, low-rank constraint, NLINV
• Sebastian Rosenzweig, H. Christian M. Holme, Martin Uecker. Simple Auto-Calibrated Gradient Delay Estimation From Few Spokes Using Radial Intersections (RING). Magnetic Resonance in Medicine 81:1898-1906 (2019) arXiv:1805.04334 [physics.med-ph] [source code]
  Keywords: trajectory correction, radial imaging, gradient delay, artifacts, system imperfections, RING
• Volkert Roeloffs, Sebastian Rosenzweig, H. Christian M. Holme, Martin Uecker, Jens Frahm. Frequency-modulated SSFP with radial sampling and subspace reconstruction: A time-efficient alternative to phase-cycled bSSFP. Magnetic Resonance in Medicine 81:1566-1579 (2019) arXiv:1803.06274 [physics.med-ph] [source code]
  Keywords: subspace reconstruction, bSSFP, fmSSFP, frequency-modulated SSFP, banding, preparation phases
• Xiaoqing Wang, Dirk Voit, Volkert Roeloffs, Martin Uecker, Jens Frahm. Fast Interleaved Multi-Slice T1 Mapping -- Model-based Reconstruction of Single-Shot Inversion-Recovery Radial FLASH. Computational and Mathematical Methods in Medicine 2018:2560964 (2018) [open access] PMC6110002
  Keywords: model-based reconstruction, multi-slice T1 mapping, nonlinear, inverse reconstruction, sparsity constraint, Look-Locker, parallel imaging
• Ali Seif Amir Hosseini, Alexander Beham, Johannes Uhlig, Ulrike Streit, Annemarie Uhlig, Volker Ellenrieder, Arun A Joseph, Dirk Voit, Jens Frahm, Martin Uecker, Joachim Lotz, Lorenz Biggemann. Intra- and interobserver variability in the diagnosis of GERD by real-time MRI. European Journal of Radiology 104:14-19 (2018)
  Keywords: Real-time MRI, Gastroesophageal reflux disease (GERD), His-angle
• Sebastian Rosenzweig, H. Christian M. Holme, Robin N. Wilke, Dirk Voit, Jens Frahm, Martin Uecker. Simultaneous Multi-Slice Reconstruction Using Regularized Nonlinear Inversion: SMS-NLINV. Magnetic Resonance in Medicine 79:2057-2066 (2018) arXiv:1705.04135 [physics.med-ph] [source code] Gö-VIP-16 Clinical Science Award
  Keywords: simultaneous multi-slice, multi-band, regularized nonlinear inversion, nonlinear inversion, parallel imaging
• Xiaoqing Wang, Volkert Roeloffs, Jakob Klosowski, Zhengguo Tan, Dirk Voit, Martin Uecker, Jens Frahm. Model-based T1 Mapping with Sparsity Constraints Using Single-Shot Inversion-Recovery Radial FLASH. Magnetic Resonance in Medicine 79:730-740 (2018)
  Keywords: model-based reconstruction, sparsity constraint, Look-Locker, T1 mapping, parallel imaging
• Mehdi H. Moghari, Martin Uecker, Sebastien Roujol, Majid Sabbagh, Tal Geva, Andrew J. Powell. Accelerated Whole-heart Magnetic Resonance Angiography Using a Variable-Density Poisson-Disc Undersampling Pattern and Compressed Sensing Reconstruction. Magnetic Resonance in Medicine 79:761-769 (2018) PMC6487645
  Keywords: Whole-heart angiography, respiratory motion, self-navigator, variable density undersampling, compressed sensing
• Sebastian Schaetz, Dirk Voit, Jens Frahm, Martin Uecker. Accelerated Computing in Magnetic Resonance Imaging - Real-Time Imaging Using Non-Linear Inverse Reconstruction. Computational and Mathematical Methods in Medicine 2017:3527269 (2017) [open access] PMC5804376 [pubman] arXiv:1701.08361 [cs.DC]
  Keywords: MRI, GPU, accelerator, parallelism, concurrency
• Joseph Y. Cheng, Tao Zhang, Marcus T. Alley, Martin Uecker, Michael Lustig, John M. Pauly, Shreyas S. Vasanawala. Comprehensive Multi-Dimensional MRI for the Simultaneous Assessment of Cardiopulmonary Anatomy and Physiology. Scientific Reports 7:5330 (2017) [open access] PMC5509743
  Keywords: 3-D reconstruction, biomedical engineering, magnetic resonance imaging
• Christina Unterberg-Buchwald, Christian Oliver Ritter, Verena Reupke, Robin N. Wilke, Christine Stadelmann, Michael Steinmetz, Andreas Schuster, Gerd Hasenfuß, Joachim Lotz, Martin Uecker. Targeted endomyocardial biopsy guided by real-time magnetic resonance imaging. Journal of Cardiovascular Magnetic Resonance 19:45 (2017) [open access] PMC5395773
  Keywords: Endomyocardial biopsy, CMR, Targeted biopsy, Real-time MRI
• Shanshan Bao, Jonathan I. Tamir, Jeffrey L. Young, Umar Tariq, Martin Uecker, Peng Lai, Weitian Chen, Michael Lustig, Shreyas S. Vasanawala. Fast comprehensive single-sequence four-dimensional pediatric knee MRI with T2 shuffling. Journal of Magnetic Resonance Imaging 45:1700-1711 (2017) PMC6726427
  Keywords: knee MRI, pediatric, volumetric, compressed sensing, CUBE, SPACE
• Martin Uecker, Michael Lustig. Estimating Absolute-Phase Maps Using ESPIRiT and Virtual Conjugate Coils. Magnetic Resonance in Medicine 77:1201-1207 (2017) PMC5018407 arXiv:1509.03557 [cs.CV] [source code]
  Keywords: parallel imaging, partial Fourier, ESPIRiT, virtual coil
• Jonathan I. Tamir, Martin Uecker, Weitian Chen, Peng Lai, Marcus T. Alley, Shreyas S. Vasanawala, Michael Lustig. T2 Shuffling: Sharp, Multicontrast, Volumetric Fast Spin-Echo Imaging. Magnetic Resonance in Medicine 77:180-195 (2017) PMC4990508 [source code]
  Keywords: fast spin-echo (FSE), T2 imaging, compressed sensing
• Joseph Y. Cheng, Kate Hanneman, Tao Zhang, Marcus T. Alley, Peng Lai, Jonathan I. Tamir, Martin Uecker, John M. Pauly, Michael Lustig, Shreyas S. Vasanawala, Comprehensive Motion-Compensated Highly-Accelerated 4D Flow MRI with Ferumoxytol Enhancement for Pediatric Congenital Heart Disease. Journal of Magnetic Resonance Imaging 43:1355-1368 (2016) PMC4865413
  Keywords: congenital heart disease; 4D flow; compressed sensing; soft-gating; motion
• Vivek Athalye, Michael Lustig, Martin Uecker. Parallel Magnetic Resonance Imaging as Approximation in a Reproducing Kernel Hilbert Space. Inverse Problems 31:045008 (2015) arXiv:1310.7489 [physics.med-ph] PMC4429804
  Keywords: reproducing kernel Hilbert space; magnetic resonance imaging; image reconstruction; approximation; inverse problems; non-Cartesian sampling
• Joseph Y. Cheng, Tao Zhang, Nichanan Ruangwattanapaisarn, Marcus T. Alley, Martin Uecker, John M. Pauly, Michael Lustig, Shreyas S. Vasanawala. Free-Breathing Pediatric MRI with Nonrigid Motion Correction and Acceleration. Journal of Magnetic Resonance Imaging 42:407--420 (2015) PMC4404177 2015 ISMRM Young Investigator (W. S. Moore) Award, Winner
  Keywords: pediatric abdominal MRI; nonrigid motion; soft-gating; autofocus; parallel imaging; compressed sensing
• Peter J. Shin, Peder E. Z. Larson, Martin Uecker, Galen D. Reed, Adam B. Kerr, James Tropp, Michael A. Ohliger, Sarah J. Nelson, John M. Pauly, Michael Lustig, Daniel B. Vigneron. Chemical Shift Separation with Controlled Aliasing for Hyperpolarized 13 C Metabolic Imaging. Magnetic Resonance in Medicine 74:978--989 (2015) PMC4390401
  Keywords: hyperpolarized 13C metabolic imaging; chemical shift separation; controlled aliasing; multiband RF pulse; flyback EPI trajectory; nonlinear inversion method
• Tilman J. Sumpf, Andreas Petrovic, Martin Uecker, Florian Knoll, Jens Frahm. Fast T2 Mapping with Improved Accuracy Using Undersampled Spin-echo MRI and Model-based Reconstructions with a Generating Function. IEEE Transactions on Medical Imaging 33:2213-2222 (2014) arxiv:1405:3574 [physics.med-ph] PMC4469336 [PubMan] [source code]
  Keywords: FSE; indirect echoes; reconstruction; relaxometry; T2 mapping
• Frank Ong, Martin Uecker, Umar Tariq, Albert Hsiao, Marcus T. Alley, Shreyas S. Vasanawala, Michael Lustig. Robust 4D Flow Denoising using Divergence-free Wavelet Transform. Magnetic Resonance in Medicine 73:828-842 (2015) PMC4139475 [source code]
  Keywords: four-dimensional flow; wavelet denoising; divergence-free
• Jens Frahm, Sebastian Schätz, Markus Untenberger, Shuo Zhang, Dirk Voit, K. Dietmar Merboldt, Jan M. Sohns, Joachim Lotz, Martin Uecker. On the temporal fidelity of nonlinear inverse reconstructions for real-time MRI -- The motion challenge. The Open Medical Imaging Journal 8:1-7 (2014) [open access]
  Keywords: real-time MRI; radial MRI; iterative reconstruction; temporal fidelity
• Tao Zhang, Joseph Y. Cheng, Aaron G. Potnick, Richard A. Barth, Marcus T. Alley, Martin Uecker, Michael Lustig, John M. Pauly, Shreyas S. Vasanawala. Fast Pediatric 3D Free Breathing Abdominal Dynamic Contrast Enhanced MRI with a High Spatiotemporal Resolution. Journal of Magnetic Resonance Imaging 41:460-473 (2015) PMC4065644 2014 ISMRM Young Investigator (W. S. Moore) Award, Semi-Finalist
  Keywords: pediatric dynamic contrast enhanced abdominal MRI; parallel imaging; low rank; compressed sensing
• Martin Uecker, Peng Lai, Mark J. Murphy, Patrick Virtue, Michael Elad, John M. Pauly, Shreyas S. Vasanawala, Michael Lustig. ESPIRiT - An Eigenvalue Approach to Autocalibrating Parallel MRI: Where SENSE meets GRAPPA. Magnetic Resonance in Medicine 71:990-1001 (2014) [free full text] PMC4142121 [source code] highly cited paper: top 1% in clinical medicine and highest cited paper published in Magnetic Resonance in Medicine in 2014
  Keywords: autocalibration; parallel imaging; GRAPPA; SENSE; compressed sensing
• Amir Moussavi, Markus Untenberger, Martin Uecker, Jens Frahm. Correction of gradient-induced phase errors in radial MRI Magnetic Resonance in Medicine 71:308-312 (2014) [free full text] [PubMan]
  Keywords: real-time MRI; eddy currents; phase errors; radial MRI
• Aaron Niebergall, Shuo Zhang, Esther Kunay, Götz Keydana, Michael Job, Martin Uecker, Jens Frahm. Real-time MRI of Speaking at a Resolution of 33 ms: Undersampled Radial FLASH with Nonlinear Inverse Reconstruction. Magnetic Resonance in Medicine 69:477-485 (2013) [free full text] [PubMan] featured on cover
  Keywords: real-time MRI; speaking; articulation; tongue dynamics; speech production; phonetics
• Martin Uecker, Shuo Zhang, Dirk Voit, Klaus-Dietmar Merboldt, Jens Frahm. Real Time MRI: recent advances using radial FLASH. Imaging in Medicine 4:461-476 (2012) [open access] [PubMan]
  Keywords: cardiovascular MR; dynamic imaging; MRI; nonlinear inverse reconstruction; real-time imaging; speaking; swallowing
• Arun A Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Joachim Lotz, Jens Frahm. Real-time phase-contrast MRI of cardiovascular blood flow using undersampled radial fast low-angle shot and nonlinear inverse reconstruction. NMR in Biomedicine 25:917-924 (2012) [PubMan]
  Keywords: cardiovascular MRI; flow imaging; heart function; nonlinear inverse reconstruction; phase-contrast imaging; real-time imaging
• Florian Knoll, Christian Clason, Kristian Bredies, Martin Uecker, Rudolf Stollberger. Parallel Imaging with Nonlinear Reconstruction using Variational Penalties. Magnetic Resonance in Medicine 67:34-41 (2012) [free full text] PMC4011127 [PubMan] [source code] 2011 Stefan-Schuy-Award, Austrian Society for Biomedical Engineering, Winner
  Keywords: parallel imaging; radial sampling; pseudorandom sampling; nonlinear inversion; total variation; total generalized variation; compressed sensing
• Klaus-Dietmar Merboldt, Martin Uecker, Dirk Voit, Jens Frahm. Spatially Encoded Phase-Contrast MRI -- 3D MRI movies of 1D and 2D Structures at Millisecond Resolution. Magnetic Resonance in Medicine 66:950-995 (2011) [free full text] [PubMan]
  Keywords: 3D MRI; 3D imaging; iterative reconstruction; parallel imaging; phase-contrast imaging; real-time imaging
• Martin Uecker, Tilman J Sumpf, Jens Frahm. Reply To: MRI Resolution Enhancement: How Useful are Shifted Images Obtained by Changing the Demodulation Frequency? Magnetic Resonance in Medicine 66:1511-1512 (2011) [free full text] [PubMan]
  Keywords: super-resolution; resolution enhancement; magnetic resonance imaging; image reconstruction
• Tilman J Sumpf, Martin Uecker, Susann Boretius, Jens Frahm, Model-based Nonlinear Inverse Reconstruction for T2 Mapping Using Highly Undersampled Spin-Echo MRI. Journal of Magnetic Resonance Imaging 34:420-428 (2011) [free full text] [PubMan] [source code]
  Keywords: quantitative MRI; T2 mapping; T2 relaxivity; human brain; model-based reconstruction; nonlinear inversion
• Shuo Zhang, Martin Uecker, Dirk Voit, Klaus-Dietmar Merboldt, Jens Frahm. Real-time cardiac MRI at high temporal resolution: radial FLASH with nonlinear inverse reconstruction. Journal of Cardiovascular Magnetic Resonance 12:39 (2010) [open access] PMC2911425 [PubMan]
  Keywords: real time; cardiovascular MRI
• Martin Uecker, Shuo Zhang, Dirk Voit, Alexander Karaus, Klaus-Dietmar Merboldt, Jens Frahm. Real-time magnetic resonance imaging at a resolution of 20 ms. NMR in Biomedicine 23:986-994 (2010) [PubMan] [source code]
  Keywords: dynamic imaging; MRI; real time; movie; turbulent flow; speech production; heart function; cardiovascular MRI
• Martin Uecker, Shuo Zhang, Jens Frahm. Nonlinear Inverse Reconstruction for Real-time MRI of the Human Heart Using Undersampled Radial FLASH. Magnetic Resonance in Medicine 63:1456-1462 (2010) [free full text] [PubMan] [source code]
  Keywords: inverse problems; iterative reconstruction; parallel imaging; nonlinear inversion; real-time imaging; cardiac imaging; graphical processing units (GPU)
• Martin Uecker, Alexander Karaus, Jens Frahm. Inverse Reconstruction Method for Segmented Multi-shot Diffusion-weighted MRI With Multiple Coils. Magnetic Resonance in Medicine 62:1342-1348 (2009) [free full text] [PubMan]
  Keywords: multishot diffusion-weighted imaging; inverse problems; iterative reconstruction; parallel imaging; nonlinear inversion; stimulated echo acquisition mode
• Kai Tobias Block, Martin Uecker, Jens Frahm. Model-based Iterative Reconstruction for Radial Fast Spin-Echo MRI. IEEE Transactions on Medical Imaging 28:1759-1769 (2009) [PubMan] arXiv:1603.00040 [physics.med-ph]
  Keywords: inverse problems, iterative reconstruction, non-Cartesian magnetic resonance imaging (MRI), radial sampling, turbo spin-echo, model-based reconstruction
• Kai Tobias Block, Martin Uecker, Jens Frahm. Suppression of MRI Truncation Artifacts Using Total Variation Constrained Data Extrapolation. International Journal of Biomedical Imaging, Volume 2008, 2008:184123 [open access] PMC2531202 [PubMan]
  Keywords: inverse problems; total variation; Gibbs ringing; superresolution
• Martin Uecker, Thorsten Hohage, Kai Tobias Block, Jens Frahm. Image Reconstruction by Regularized Nonlinear Inversion - Joint Estimation of Coil Sensitivities and Image Content. Magnetic Resonance in Medicine 60:674-682 (2008) [free full text] [PubMan] [source code] Gorter Award, Finalist
  Keywords: inverse problems; iterative reconstruction; parallel imaging; nonlinear inversion
• Kai Tobias Block, Martin Uecker, Jens Frahm. Undersampled Radial MRI with Multiple Coils. Iterative Image Reconstruction Using a Total Variation Constraint. Magnetic Resonance in Medicine 57:1086-1098 (2007) [free full text] [PubMan] 2007 ISMRM Young Investigator (I.I. Rabi) Award, Winner
  Keywords: compressed sensing; inverse problems; iterative reconstruction; projection reconstruction; regridding

Conference Papers

• Martin Uecker. Autocalibrating and Calibrationless Parallel Magnetic Resonance Imaging as a Bilinear Inverse Problem. 12h International Conference on Sampling Theory and Applications (SampTA), Tallinn 2017, In: Sampling Theory and Applications (SampTA), 2017 International Conference on, 111-113 arXiv:1705.04081 [physics.med-ph]
• Majid Sabbagh, Martin Uecker, Andrew J. Powell, Miriam Leeser, Mehdi H. Moghari. Cardiac MRI Compressed Sensing Image Reconstruction with a Graphics Processing Unit. 10th International Symposium on Medical Information and Communication Technology (ISMICT'16), Worcester 2016, In 2016 10th International Symposium on Medical Information and Communication Technology (ISMICT), 1-5 (2016) preprint
• Frank Ong, Martin Uecker, Umar Tariq, Alber Hsiao, Marcus T Alley, Shreyas S Vasanawala, Michael Lustig. Improved Visualization and Quantification of 4D Flow MRI Data Using Divergence-Free Wavelet Denoising. International Symposium on Biomedical Imaging: From Nano to Macro, San Francisco 2013, In Biomedical Imaging (ISBI), 2013 IEEE 10th International Symposium on, 1186-1189 (2013) preprint
• Sebastian Schätz, Martin Uecker. A Multi-GPU Programming Library for Real-Time Applications, 12th International Conference on Algorithms and Architectures for Parallel Processing (ICA3PP-2012), Fukuoka 2012, In Lecture Notes in Computer Science, 7439:114-128 (2012) arXiv:1301.1215 [cs.DC] [source code]

Book Chapters

• Martin Uecker, Parallel Magnetic Resonance Imaging, In: MRI: Physics, Image Reconstruction, and Analysis, CRC Press 2015, pp. 73-92, ISBN 9781482298871 arXiv:1501.06209 [cs.NA]
• Jens Frahm, Martin Uecker, Dirk Voit, Shuo Zhang, Magnetresonanz-Tomografie in Echtzeit, Göttingen 2011, In: E. M. Neher (Ed.), Aus den Elfenbeintürmen der Wissenschaft 5. XLAB Science Festival, Wallstein Verlag 2011, pp. 99-110, ISBN: 978-3-8353-1027-8 [PubMan]
• Jens Frahm and Martin Uecker, Echtzeit-MRT: die Zweite, Göttingen 2010, In: Jahrbuch der Akademie der Wissenschaften zu Göttingen 2010, de Gruyter, Berlin 2011, pp. 265-270, ISBN 978-3-11-023676-7 [free full text] [PubMan]

Supervised Theses

• Christian Holme, Higher-Dimensional Extensions of Nonlinear Inverse Reconstruction for Magnetic Resonance Imaging, Doctoral thesis
• Lennart Schlieder, Rekonstruktion von unterabgetasteten MRT-Daten mit Hilfe von künstlichen neuronalen Netzwerken, Master thesis (physics)
• Nick Scholand, Model-Based Reconstruction for Quantitative MRI using the Bloch Equations, Master thesis (physics) arXiv:1905.03188 [physics.med-ph]
• Rabea Pons, Bewegungsrobuste Magnetresonanztomographie durch randomisierte Abtastung und iterative Bildrekonstruktion mit L1-Datenkonsistenzterm, Master thesis (engineering), with Wolfram Müller, HAWK
• Sebastian Rosenzweig, Simultaneous multi-slice reconstruction by Regularized Nonlinear Inversion, Master thesis (physics) arXiv:1612.05479 [physics.med-ph]

Theses

• Martin Uecker, Nonlinear Reconstruction Methods for Parallel Magnetic Resonance Imaging, Doctoral thesis, Institut für Numerische und Angewandte Mathematik, Universität Göttingen 2009 [free full text] [PubMan]
• Martin Uecker, Lokale Gleichgewichtszustände des elektromagnetischen Feldes, Diploma thesis, Institut für Theoretische Physik, Universität Göttingen 2005 [free full text]

Refereed Conference Abstracts

• Nick Scholand, Xiaoqing Wang, Sebastian Rosenzweig, Martin Uecker. Generalized model-based reconstruction for quantitative MRI using the Bloch-Equations. ESMRMB 2019 Congress, Rotterdam 2019, In: Magn Reson Mater Phy (2019) 32(Suppl 1): 235. DOI: 10.1007/s10334-019-00755-1
• Xiaoqing Wang, Sebastian Rosenzweig, Nick Scholand, H. Christian M. Holme, and Martin Uecker. Model-based reconstruction for simultaneous multi-slice T1 mapping using single-shot inversion-recovery radial FLASH Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 313 (2019) ISMRM Merit Award, magna cum laude
• Sebastian Rosenzweig, Christian M. Holme, and Martin Uecker. Simple Auto-Calibrated Gradient Delay Estimation From Few Spokes Using Radial Intersections (RING) for Interactive Real-time MRI. Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 445 (2019) ISMRM Merit Award, magna cum laude
• Zhengguo Tan, Dirk Voit, Jost Kollmeier, Martin Uecker, and Jens Frahm. Dynamic Water/Fat Separation and Field Inhomogeneity Mapping at a Temporal Resolution of 40 ms. Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 689 (2019) ISMRM Merit Award, summa cum laude
• Nick Scholand, Sebastian Rosenzweig, Felix Ertingshausen, and Martin Uecker. Plastic Bricks in MRI: An Efficient Way to Build Static and Dynamic Phantoms Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 1593 (2019)
• Sebastian Rosenzweig, Nick Scholand, H. Christian M. Holme, and Martin Uecker. Robust Cardiac and Respiratory Self-Gating Using an Adapted Singular Spectrum Analysis (SSA-FARI): Application to Simultaneous-Multi-Slice Imaging. Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 2444 (2019)
• Volkert Roeloffs, Martin Uecker, Jens Frahm. Joint T1 and T2 Mapping with Tiny Dictionaries and Subspace-Constrained Reconstruction. Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 4419 (2019)
• H. Christian M. Holme, Sebastian Rosenzweig, Xiaoqing Wang, and Martin Uecker. Non-linear Inverse Compressed-Sensing Reconstruction for Self-Gated Multidimensional Cardiac MRI: XD-NLINV. Annual Meting ISMRM, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med. 27; 4753 (2019)
• Sebastian Rosenzweig, Nick Scholand, H. Christian M. Holme, and Martin Uecker. Robust Cardiac and Respiratory Self-Gating using an adapted Singular Spectrum Analysis. SCMR 2019, Bellevue
• Xiaoqing Wang, Sebastian Rosenzweig, Florian Kohler, Christina Unterberg-Buchwald, and Martin Uecker. Model-based myocardial T1 mapping with sparsity constraints using single-shot inversion-recovery radial FLASH. SCMR 2019, Bellevue, P149.
• Michael Steinmetz, Thomas Stümpfig, Johannes Kowallick, Andreas Schuster, Martin Uecker, and Joachim Lotz. Impaired exercise tolerance after repair of Tetralogy of Fallot – insights from real time cardiovascular magnetic resonance imaging. SCMR 2019, Bellevue, P188.
• Elham Mohammadi, Sebastian Rosenzweig, Martin Uecker, and Abbas N. Moghaddam. Real-time radial tagging with radial FLASH: preliminary results. SCMR 2019, Bellevue, P331
• Martin Uecker and Xiaoqing Wang. Model-based Reconstruction for Quantitative Parameter Mapping in Magnetic Resonance Imaging. GAMM 2018.
• Sebastian Rosenzweig, H. Christian M. Holme, Nick Scholand, Robin N. Wilke, and Martin Uecker. Self-Gated and Real-time Simultaneous Multi-Slice Cardiac MRI from the Same Acquisition. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 209 (2018) ISMRM Merit Award, summa cum laude
• Sebastian Rosenzweig, H. Christian M. Holme, Robin N. Wilke, and Martin Uecker. Extending the Simple Method for Adaptive Gradient-Delay Compensation in Radial MRI. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 4207 (2018)
• H. Christian M. Holme, Nick Scholand, Sebastian Rosenzweig, Robin N. Wilke, and Martin Uecker. Banding-Free Reconstruction in Frequency-Modulated bSSFP using Virtual Coils with Regularized Non-Linear Inversion. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 2870 (2018)
• Frank Ong, Martin Uecker, Michael Lustig. k-space Diagonal Preconditioner: Speeding Up Iterative Reconstruction For Variable Density Sampled Acquisitions Without Compromises. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 934 (2018)
• Martin Uecker. Machine Learning Using the BART Toolbox - Implementation of a Deep Convolutional Neural Network for Denoising. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 2802 (2018)
• Xiaoqing Wang, Dirk Voit, Volkert Roeloffs, Martin Uecker, and Jens Frahm. Single-shot multi-slice T1 mapping using inversion recovery radial FLASH and model-based reconstruction. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 5639 (2018)
• Volkert Roeloffs, Jost M. Kollmeier, Nick Scholand, Dirk Voit, Sebastian Rosenzweig, H. Christian M. Holme, Martin Uecker, and Jens Frahm. Joint T1/T2 mapping with frequency-modulated SSFP, radial sampling, and subspace reconstruction. Joint Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med. 26; 2767 (2018)
• Kerstin Laubrock, E. Thassilo von Loesch, Johannes T. Kowallick, Michael Steinmetz, Martin Fasshauer, Joachim Lotz, Martin Uecker, Andreas Schuster, Christina Unterberg-Buchwald, Left Ventricular Feature Tracking In Real Time CMR: Comparison With Standard CINE BSSFP In Sinus Rhythm And Atrial Fibrillation, Society for Cardiovascular Magnetic Resonance Scientific Sessions 2018, Barcelona, 651
• Sebastian Rosenzweig, H. Christian M. Holme, Robin N. Wilke, and Martin Uecker, Simultaneous Multi-Slice Real-Time Imaging with Radial Multi-Band FLASH and Nonlinear Inverse Reconstruction, Annual Meeting ISMRM, Honolulu 2017, In Proc. Intl. Soc. Mag. Reson. Med. 25; 518 (2017) [pdf]
• Sebastian Rosenzweig and Martin Uecker, Simultaneous Orthogonal Multi-Slice Imaging, Annual Meeting ISMRM, Honolulu 2017, In Proc. Intl. Soc. Mag. Reson. Med. 25; 3845 (2017) [pdf]
• Teresa Ou, Frank Ong, Martin Uecker, Laura Waller and Michael Lustig, NUFFT: Fast Auto-tuned GPU-Based Library, Annual Meeting ISMRM, Honolulu 2017, In Proc. Intl. Soc. Mag. Reson. Med. 25; 3807 (2017)) [pdf]
• Felix Arndt et al., Open Source Imaging Initiative (OSI2) - Update and Roadmap, Annual Meeting ISMRM, Honolulu 2017, In Proc. Intl. Soc. Mag. Reson. Med. 25; 4463 (2017) [pdf]
• H. Christian M. Holme, Frank Ong, Sebastian Rosenzweig, Robin N. Wilke, Michael Lustig, and Martin Uecker, ENLIVE: A Non-Linear Calibrationless Method for Parallel Imaging using a Low-Rank Constraint, Annual Meeting ISMRM, Honolulu 2017, In Proc. Intl. Soc. Mag. Reson. Med. 25; 5160 (2017) [pdf]
• Shanshan Bao, Jonathan I. Tamir, Umar Tariq, Martin Uecker, Peng Lai, Weitian Chen, Michael Lustig, and Shreyas S. Vasanawala, Fast single sequence comprehensive 4D pediatric knee MRI with T2 Shuffling, Annual Meeting ISMRM, Singapore 2016, In Proc. Intl. Soc. Mag. Reson. Med 24; 1060 (2016) [pdf] ISMRM Merit Award, summa cum laude
• Nicholas R. Zwart, Ashley G. Anderson III, Ryan K. Robison, Andrew Li, Mariya Doneva, Frank Ong, Martin Uecker, Michael Lustig, and James G. Pipe, Uniting Reconstruction Software for Native Use in GPI, Annual Meeting ISMRM, Singapore 2016, In Proc. Intl. Soc. Mag. Reson. Med 24; 1781 (2016) [pdf]
• Mehdi Hedjazi Moghari, Martin Uecker, Sebastien Roujol, Tal Geva, and Andrew J Powell, Three Minute Whole-heart Magnetic Resonance Angiography with Prospective Heart Tracking and Compressed Sensing Parallel Image Reconstruction, Annual Meeting ISMRM, Singapore, 2016, In Proc. Intl. Soc. Mag. Reson. Med 24; 3183 (2016) [pdf]
• Sebastian Rosenzweig and Martin Uecker, Reconstruction of multiband MRI data using Regularized Nonlinear Inversion, Annual Meeting ISMRM, Singapore 2016, In Proc. Intl. Soc. Mag. Reson. Med 24; 3259 (2016) [pdf]
• Martin Uecker, Frank Ong, Jonathan I Tamir, Dara Bahri, Patrick Virtue, Joseph Y Cheng, Tao Zhang, and Michael Lustig. Berkeley Advanced Reconstruction Toolbox, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 2486 (2015)
• Vivek Athalye, Michael Lustig, and Martin Uecker. A Theory for Sampling in k-Space - Parallel Imaging as Approximation in a Reproducing Kernel Hilbert Space, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 2432 (2015)
• Joseph Y Cheng, Tao Zhang, Nichanan Ruangwattanapaisarn, Marc T Alley, Martin Uecker, John M Pauly, Michael Lustig, Shreyas S Vasanawala, Free-Breathing Pediatric MRI with Non-rigid Motion Correction and Acceleration, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 32 (2015)
• Joseph Y Cheng, Marcus T Alley, Tao Zhang, Peng Lai, Jonathan I Tamir, Martin Uecker, John M Pauly, Michael Lustig, and Shreyas S Vasanawala. Soft-gated accelerated Cartesian 4D flow imaging with intrinsic navigation. Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 451 (2015) ISMRM Merit Award, summa cum laude
• Joseph Y Cheng, Kate Hanneman, Tao Zhang, Marcus T Alley, Peng Lai, Jonathan I Tamir, Martin Uecker, Michael Lustig, John M Pauly, and Shreyas S Vasanawala, Impact of View Ordering and Soft-Gating on Morphologic Assessment of Congenital Heart Disease with 4D Flow, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 4548 (2015)
• Jonathan I Tamir, Weitian Chen, Peng Lai, Martin Uecker, Shreyas S Vasanawala, and Michael Lustig. T2 Shuffling: Multicontrast 3D Fast Spin Echo Imaging, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 3399 (2015)
• Jonathan I Tamir, Weitian Chen, Peng Lai, Martin Uecker, and Michael Lustig. Improved Scan Efficiency of 3D Fast Spin Echo with Subspace-Constrained Reconstruction, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 2463 (2015)
• Frank Ong, Tao Zhang, Joseph Cheng, Martin Uecker, and Michael Lustig. Beyond Low Rank + Sparse: Multi-scale Low Rank Reconstruction for Dynamic Contrast Enhanced Imaging, Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 575 (2015) ISMRM Merit Award, magna cum laude
• Frank Ong, Martin Uecker, Wenwen Jiang, and Michael Lustig. Fast Non-Cartesian Reconstruction with Pruned Fast Fourier Transform. Annual Meeting ISMRM, Toronto 2015, In Proc. Intl. Soc. Mag. Reson. Med 23; 3639 (2015)
• Peter J Shin, Peder E Larson, Martin Uecker, Galen Reed, Adam B Kerr, John M Pauly, Michael Lustig, and Daniel B Vigneron. Chemical Shift Separation method based on Parallel Imaging for Hyperpolarized 13C MR Molecular Imaging. World Molecular Imaging Congress, Seoul 2014. P135
• Frank Ong, Martin Uecker, Umar Tariq, Albert Hsiao, Marcus Alley, Shreyas Vasanawala, and Michael Lustig. Compressed Sensing 4D Flow Reconstruction using Divergence-Free Wavelet Transform. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 326 (2014) ISMRM Merit Award, magna cum laude
• Tao Zhang, Joseph Cheng, Marcus Alley, Martin Uecker, Michael Lustig, John Pauly, Shreyas Vasanawala. Fast 3D Free-Breathing Abdominal Dynamic Contrast Enhanced MRI with High Spatiotemporal Resolution. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 332 (2014)
• Jonathan I Tamir, Peng Lai, Martin Uecker, and Michael Lustig. Reduced Blurring in 3D Fast Spin Echo through Joint Temporal ESPIRiT Reconstruction. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 0616 (2014) ISMRM Merit Award, magna cum laude
• Dan Zhu, Martin Uecker, Joseph Y Cheng, Zhongyuan Bi, Kui Ying, and Michael Lustig. Calibration for Parallel MRI Using Robust Low-Rank Matrix Completion. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 741 (2014)
• Joseph Y Cheng, Tao Zhang, Xinwei Shi, Martin Uecker, Marcus T Alley, John M Pauly, Michael Lustig, and Shreyas S Vasanawala. Slice-Localized Soft-Gating for Non-rigid Motion Correction in Free-Breathing 3D Cartesian MRI. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 1611 (2014)
• Martin Uecker and Michael Lustig. Robust Partial Fourier Parallel Imaging Using ESPIRiT and Virtual Conjugate Coils. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 1629 (2014)
• Wenwen Jiang, Michael Lustig, Martin Uecker, and Peder EZ Larson. Evaluating the Efficiency of Concentric Rings Trajectory for Hyperpolarized 13 C MR Spectroscopic Imaging. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 2766 (2014)
• Dara Bahri, Martin Uecker, and Michael Lustig. Three-Nearest-Neighbor Alignment for Smooth ESPIRiT Maps. Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med. 22; 4394 (2014)
• Jan M Sohns, Johannes T Kowallick, Christina Unterberg-Buchwald, Wieland Staab, Arun Joseph, Klaus-Dietmar Merboldt, Martin Uecker, Dirk Voit, Shuo Zhang, Jens Frahm, and Joachim Lotz. Echtzeit-Cardio-MRT-Phasenkontrast-Flussmessungen mit dem Valsalva- und Müllermaneuver als Stresstest, 94. Deutscher Röntgenkongress, Hamburg 2013, Fortschr Röntgenstr; 185 - VO105_I_5 (2013)
• Martin Uecker, Patrick Virtue, Shreyas S Vasanawala, and Michael Lustig. ESPIRiT Reconstruction Using Soft SENSE. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 127 (2013) ISMRM Merit Award, magna cum laude
• Joseph Y. Cheng, Martin Uecker, Marcus T Alley, Michael Lustig, Shreyas S Vasanawala, and John M Pauly. Free-Breathing Pediatric Imaging with Parallel Imaging and Nonrigid Motion Correction. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 312 (2013)
• Shuo Zhang, Alexander Beham, Arun Joseph, Henrik Forster, Aaron Niebergall, Martin Uecker, and Jens Frahm. Real-time MRI of Esophageal Function at a Resolution of 50 ms: Initial Results in Healthy Subjects. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 676 (2013)
• Zhongyuan Bi, Martin Uecker, Dengrong Jiang, Michael Lustig, and Kui Ying. Robust Low-rank Matrix Completion for sparse motion correction in auto calibration PI. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Recon. Med 21; 2584 (2013)
• Martin Uecker and Michael Lustig. Memory-Saving Iterative Reconstruction on Overlapping Blocks of K-Space. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 2645 (2013)
• Dara Bahri, Martin Uecker, and Michael Lustig. ESPIRIT-Based Coil Compression for Cartesian Sampling. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 2657 (2013)
• Patrick Virtue, Martin Uecker, Michael Elad, and Michael Lustig. Predicting Image Quality of Under-Sampled Data Reconstruction in the Presence of Noise. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med. 21; 2668 (2013)
• Shuo Zhang, Martin Uecker, and Jens Frahm. T1 Mapping in Real Time: Single Inversion-Recovery Radial FLASH with Nonlinear Inverse Reconstruction. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med. 21; 3700 (2013)
• Amir Moussavi, Markus Untenberger, Martin Uecker, and Jens Frahm. Correction of gradient-induced phase errors in radial MRI. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson Med 21; 3776 (2013)
• Peter J Shin, Peder EZ Larson, Martin Uecker, Michael Lustig, and Daniel B Vigneron. Multi-Resonance 3D Spin-Echo EPI with Chemical Separation for Fast Hyperpolarized 13C MRI. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson Med 21; 3954 (2013)
• Markus F Untenberger, Martin Uecker, Dirk Voit, and Jens Frahm. Water-Fat Separation using Time Series Correlation. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med. 21; 4274 (2013)
• Markus F Untenberger, Martin Uecker, Sebastian Schaetz, Dirk Voit, and Jens Frahm. Real-Time Water-Fat Separation. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med. 21; 4275 (2013)
• Klaus-Dietmar Merboldt, Dirk Voit, Martin Uecker, and Jens Frahm. Dynamic 3D Localization in Real Time using Spatial Phase-Contrast MRI. Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med. 21; 4323 (2013)
• Frank Ong, Martin Uecker, Umar Tariq, Albert Hsiao, Marcus T Alley, Shreyas S Vasanawala, and Michael Lustig. Improved Visualization and Quantification of 4D Flow MRI Data using Divergence-free Wavelet Denoising. Annual Meeting ISMRM, Salt Lake City 2013, In Proc. Intl. Soc. Mag. Reson. Med 21; 4443 (2013)
• Kevin Epperson, Anne Marie Sawyer, Michael Lustig, Marcus Alley, Martin Uecker, Patrick Virtue, Peng Lai, Shreyas Vasanawala. Creation of Fully Sampled MR Data Repository for Compressed Sensing of the Knee. SMRT 22nd Annual Meeting, Salt Lake City 2013 SMRT 1st Place Research Focus Poster Award
• Frank Ong, Martin Uecker, Umar Tariq, Albert Hsiao, Shreyas S Vasanawala, and Michael Lustig. Improved visualization and quantification of 4D flow data using divergence-free wavelets. SCMR, San Francisco 2013, J Cardiovasc Magn Reson 2013; 15(Suppl 1): E26.
• Joachim Lotz, Jan M Sohns, Michael Steinmetz, Johannes T Kowallick, Christina Schulte, Wieland Staab, Arun Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Christina Unterberg-Buchwald, Gerd Hasenfus, and Jens Frahm. High resolution real-time CMR of function and flow: initial clinical results. SCMR, San Francisco 2013, J Cardiovasc Magn Reson 2013; 15(Suppl 1): E99.
• Jan M Sohns, Christina Unterberg-Buchwald, Johannes T Kowallick, Michael Steinmetz, Christina Schulte, Wieland Staab, Arun Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Jens Frahm, and Joachim Lotz. Real-time cardiac phase contrast MRI blood flow including Valsalva and Mueller maneuver. Initial experiences. SCMR, San Francisco 2013, J Cardiovasc Magn Reson 2013; 15(Suppl 1):E17.
• Klaus-Dietmar Merboldt, Dirk Voit, Martin Uecker, and Jens Frahm, Dynaic 3D Localization using Spatial Phase-Contrast MRI in Real Time, 9th IMRI, Boston 2012, In Proceedings of the 9th Interventional MRI Symposium, Poster 49, p. 106 (2012)
• Dirk Voit, Klaus-Dietmar Merboldt, Martin Uecker, Arun A. Joseph, Joachim Lotz, and Jens Frahm, Real-time MRI of Cardiac Function and Flow at a Resolution of 35 ms, 9th IMRI, Boston 2012, In Proceedings of the 9th Interventional MRI Symposium, Oral V8, p. 27 (2012)
• Michael O. Zenge, Martin Uecker, Gerald Mattauch, and Jens Frahm, Continuous Table Movement MRI in a Single Breath-Hold: Highly Undersampled Radial Acquisitions with Nonlinear Iterative Reconstruction and Joint Coil Estimation, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 14 (2012)
• Arun A. Joseph, Dirk Voit, Klaus-Dietmar Merboldt, Martin Uecker, Shuo Zhang, and Jens Frahm, Real-Time Cardiovascular PC Imaging Using Undersampled Radial FLASH and Nonlinear Inverse Reconstruction, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 673 (2012) ISMRM Merit Award, magna cum laude
• Grzegorz Bauman, Monika Eichinger, Martin Uecker, High Temporal Resolution Radial bSSFP Sequence with Nonlinear Inverse Reconstruction for the Measurement of the Pulmonary Blood Inflow Time Using Fourier Decomposition MRI, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 1340 (2012)
• Tilman J. Sumpf, Amir Moussavi, Martin Uecker, Susann Boretius, and Jens Frahm, Effects of Phase Alternations in Nonlinear Inverse T2 Reconstructions from Undersampled Data, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 2400 (2012)
• Martin Uecker and Michael Lustig, Making SENSE of Chemical Shift: Separating Species in Single-Shot EPI using Multiple Coils, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 2490 (2012)
• Aaron Niebergall, Shuo Zhang, Martin Uecker, and Jens Frahm, Real-time MRI of Speaking: Preliminary Experience at a Temporal Resolution of 33ms, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 3687 (2012)
• Amir Moussavi, Martin Uecker, Tilman J. Sumpf, Roland Tammer, Jens Frahm and Susann Boretius, Real-time Lung MRI of the Mouse, Annual Meeting ISMRM, Melbourne 2012, In Proc. Intl. Soc. Mag. Reson. Med 20: 3976 (2012)
• Jan M. Sohns, Arun A. Joseph, Klaus-Dietmar Merboldt, Dirk Voit, Shuo Zhang, Martin Uecker, Joachim Lotz, and Jens Frahm, Quantitative Phasenkontrast-MRT der Aorta in Echtzeit - radiales FLASH mit Unterabtastung und nichtlinearer inverser Rekonstruktion, 4. Deutsche Kardiodiagnostik-Tage, Leipzig 2012, Fortschr Röntgenstr; 184 - TNE14 (2012)
• Ralf W. Bauer, Isabel Radtke, Martin Uecker, Tobias Block, Joseph M. Kerl, Thomas J. Vogl, Maya C. Larson. Echtzeit Cardio-MRT in freier Atmung und ohne EKG-Synchronisierung mittels radialer k-Raumfauslesung - Stellenwert der iterativen Rohdatenrekonstruktion. 93. Deutscher Röntgenkongress, Fortschr Röntgenstr; 184 - VO410_1 (2012)
• Ralf W. Bauer, Isabel Radtke, Martin Uecker, Shuo Zhang, Kai T. Block, Thomas G. Graf, Joseph M. Kerl, Thomas J. Vogl, Maya C. Larson. True Real-Time Cardiac MRI with Radial K-Space Sampling in Free Breathing without ECG-synchronization-Improved Image Quality with Iterative Image Reconstruction, RSNA Scientific Assembly and Annual Meeting, Chicago 2012, SSC02-07 (2012)
• Florian Knoll, Christian Clason, Kristian Bredies, Martin Uecker, and Rudolf Stollberger, Parallel Imaging with Nonlinear Reconstruction using Variational Penalties, Annual Meeting ISMRM, Montreal 2011, In Proc. Intl. Soc. Mag. Reson. Med 10: 485 (2011)
• Amir Moussavi, Martin Uecker, Tilman J. Sumpf, Roland Tammer, Jens Frahm, and Susann Boretius, Real-time Multi-slice MRI of Renal Filtration in the Mouse, Annual Meeting ISMRM, Montreal 2011, In Proc. Intl. Soc. Mag. Reson. Med 19: 950 (2011)
• Tilman J. Sumpf, Martin Uecker, Susann Boretius, and Jens Frahm, Nonlinear Inverse Reconstrution for T2 Mapping from Highly Undersampled Cartesian Spin-Echo MRI, Annual Meeting ISMRM, Montreal 2011, In Proc. Intl. Soc. Mag. Reson. Med 19: 2741 (2011)
• Kai Tobias Block and Martin Uecker, Simple Method for Adaptive Gradient-Delay Compensation in Radial MRI, Annual Meeting ISMRM, Montreal 2011, In Proc. Intl. Soc. Mag. Reson. Med 19: 2816 (2011)
• Jens Frahm, Martin Uecker, Dirk Voit, Klaus-Dietmar Merboldt, and Shuo Zhang, Real Time Cardiac MR Imaging at Ultra High Temporal Resolution. RSNA Scientific Assembly and Annual Meeting, Chicago 2010, SSA03-02 (2010)
• Shuo Zhang, Martin Uecker, Dirk Voit, and Jens Frahm, Real-time MRI at high spatial and temporal resolution, 8th IMRI, Leipzig 2010, 8th Interventional MRI Symposium - Book of Abstracts, V-51, pp. 145-146, ISBN 978-3-00-032186-3
• Shuo Zhang, Martin Uecker, Dirk Voit, and Jens Frahm, Real-time MRI at 20 millisecond resolution, European Congress of Radiology, Poster C-3415, Vienna 2010 Poster Award, magna cum laude
• Martin Uecker, Shuo Zhang, and Jens Frahm, Nonlinear Inverse Reconstruction for Real-time MRI of the Human Heart Using Undersampled Radial FLASH, Joint Annual Meeting ISMRM-ESMRMB, Stockholm 2010, In Proc. Intl. Soc. Mag. Reson. Med. 18: 4961 (2010)
• Julien Sénégas, Martin Uecker, Non-linear Inversion in Parallel MRI: Considerations on Noise Amplification in the Joint Estimation of Image and Coil Sensitivities, Joint Annual Meeting ISMRM-ESMRMB, Stockholm 2010, In Proc. Intl. Soc. Mag. Reson. Med. 18: 2873 (2010)
• Florian Knoll, Christian Clason, Martin Uecker, and Rudolf Stollberger, Improved Reconstruction in Non-Cartesian Parallel Imaging by Regularized Nonlinear Inversion, Annual Meeting ISMRM Honolulu 2009, In Proc. Intl. Soc. Mag. Reson. Med. 17: 2721 (2009)
• Martin Uecker, Alexander Karaus, and Jens Frahm, Improved Image Reconstruction for Multi-Shot Multi-Coil Diffusion Imaging, Annual Meeting ISMRM Honolulu 2009, In Proc. Intl. Soc. Mag. Reson. Med. 17: 2842 (2009)
• Martin Uecker, Simultane Schätzung von Spulensensitivitäten und Bildinhalt in der parallelen MRT -- Bildrekonstruktion mit einer nichtlinearen Regularisierungsmethode, 11. Jahrestagung der Deutschen Sektion der ISMRM e.V., Abstractband 28-30, ISSN 1863-6365, Frankfurt 2008 Gorter Award, Finalist
• Martin Uecker, Kai Tobias Block, and Jens Frahm, An Automatic Stopping Criterion for Iterative MRI Reconstructions, ISMRM Annual Meeting, Toronto 2008, In Proc. Intl. Soc. Mag. Reson. Med. 16: 1499 (2008)
• Martin Uecker, Kai Tobias Block, and Jens Frahm, Nonlinear Inversion with L1-Wavelet Regularization - Application to Autocalibrated Parallel Imaging, ISMRM Annual Meeting, Toronto 2008, In Proc. Intl. Soc. Mag. Reson. Med. 16: 1479 (2008)
• Kai Tobias Block, Martin Uecker, and Jens Frahm, Iterative Reconstruction for R2 Mapping Based on Radial Fast Spin-Echo MRI, ISMRM Annual Meeting, Toronto 2008, In Proc. Intl. Soc. Mag. Reson. Med. 16: 1432 (2008)
• Kai Tobias Block, Martin Uecker, and Jens Frahm, Suppression of MRI Truncation Artifacts Using Total Variation Constrained Data Extrapolation, ISMRM Annual Meeting, Toronto 2008, In Proc. Intl. Soc. Mag. Reson. Med. 16: 1477 (2008)
• Martin Uecker, Kai Tobias Block, and Jens Frahm, Parallel Imaging as a Non-linear Inversion Problem - Improved Reconstructions, Joint Annual Meeting ISMRM-ESMRMB, Berlin 2007, In Proc. Intl. Soc. Mag. Reson. Med 15: 1740 (2007) Poster Award, 3rd place in Pulse Sequences, Reconstruction and Analysis
• Kai Tobias Block, Martin Uecker, and Jens Frahm, Undersampled Radial MRI with Multiple Coils. Iterative Image Reconstruction Using a Total Variation Constraint, Joint Annual Meeting ISMRM-ESMRMB, Berlin 2007, In Proc. Intl. Soc. Mag. Reson. Med. 15: 145 (2007)

Invited Talks

• Nonlinear model-based reconstruction methods for MRI, Synergistic Reconstruction Symposium, Chester 2019
• Reconstruction with Machine Learning: Comparison to Existing Methods and Challenges, Annual Meeting ESMRMB, Rotterdam 2019
• Model-Based Reconstruction Methods for Accelerated Quantitative MRI, 10th Krakow Workshop on Novel Applications of Imaging and Spectroscopy in Medicine, Biology and Material Sciences, Krakow 2019
• Parallelized Iterative Reconstruction Algorithms in Magnetic Resonance Imaging, Applied Inverse Problems Conference, Genoble 2019, Minisymposium: Parallel Computing for Inverse Imaging Problems
• Designing Reusable Software Components for Computational MRI, ISMRM Annual Meeting, Montreal 2019, In Proc. Intl. Soc. Mag. Reson. Med 27; E8009 (2019)
• Building Software for Reproducible Research: Lessons from the BART Project, ISMRM Annual Meeting, Montreal 2019, Member-Initiated Symposium: Open Source Initiative for Perfusion Imaging
• Learning to reconstruct: Comparison to existing methods, new paradigms and challenges, SCMR/ISMRM Co-Provided Workshop: The Emerging Role of Machine Learning in Cardiovascular Magnetic Resonance Imaging, Bellevue, WA, 2019
• Integrating Machine Learning into the Clinical Imaging Workflow & Other Practical Considerations, ISMRM Workshop on Machine Learning, Part II, Washington DC, 2018
• Machine Learning: Introduction. Annual Meeting ISMRM-ESMRMB, Paris 2018, In Proc. Intl. Soc. Mag. Reson. Med 26; E3140 (2018)
• Calibrationless Reconstruction Methods in Magnetic Resonance Imaging, SIAM Conference on Imaging Science, Bologna 2018, Minisymposium: MS25 Bilinear and quadratic problems in imaging
• MRI as a molecular marker - Feasibility in epidemiological cohorts? Hamburg Heart Days (Cardiovascular Science Days), Hamburg 2018
• Computational Magnetic Resonance Imaging, Selected Topics in Science and Technology, Institute for Advanced Study, Technical University of Munich, 2018
• Neue Methoden fuer die beschleunigte Magnetresonanztomographie: Vom Algorithmus bis zur Anwendung, MRT-Arbeitskreis, Hannover 2018
• Low-Rank and Sparsity-Based Methods in MR Image Reconstruction, ETH, Zürich 2017
• Echtzeit-MRT: Grundlagen und Implementierung, iccas, Leipzig 2017
• Technische Grundlagen der Echtzeit-MRT, 21. Fortbildungsseminar der Arbeitsgemeinschaft Physik und Technik in der bildgebenden Diagnostik (APT): Bildgebung in μ, Makro und Echtzeit, Deutsche Röntgengesellschaft, Göttingen 2017
• Autocalibrating and Calibrationless Parallel Magnetic Resonance Imaging as a Bilinear Inverse Problem. 12h International Conference on Sampling Theory and Applications (SampTA), Tallinn 2017 arXiv:1705.04081 [cs.IT]
• The BART Toolbox for Computational Magnetic Resonance Imaging, International BASP Frontiers Workshop 2017, Villars-sur-Ollon 2017
• Iterative Reconstruction Methods in Magnetic Resonance Imaging - 10 Years' Experience with Bypassing the Vendors, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig 2016
• Computational Magnetic Resonance Imaging, ETH, Zürich 2016
• Computational Methods for Fast Imaging, Annual Meeting ESMRMB, Vienna 2016, In: Magn Reson Mater Phy 29: 123 (2016) doi:10.1007/s10334-016-0569-9 [poster]
• Sampling Theory and Algorithms for Parallel Magnetic Resonance Imaging, Max Planck Institute for biological Cybernetics, Tübingen 2016
• A Sampling Theory for Parallel Magnetic Resonance Imaging, Dept. of Experimental Radiology, Universitätsklinkum Würzburg, Würzburg 2016
• Unifying Image Reconstruction, ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona 2016
• Iterative Bildrekonstruktionsmethoden in der Magnetresonanztomographie, Universitätsklinkum Würzburg, Würzburg 2015
• Computational Magnetic Resonance Imaging, 8th International Workshop on Biomedical Applications of MRI and MRS, Krakow 2015
• Cardiac real-time MRI, DZHK Partner site meeting, Göttingen 2015
• Compressed Sensing, ESMRMB Lectures of MR - Inverse Imaging, Freiburg 2015
• Parallel Magnetic Resonance Imaging: New Methods, New Insights, SFB Research Center: Mathematical Optimization and Applications in Biomedical Sciences, Imaging with Modulated/Incomplete Data, Graz 2014
• Application of Fast Imaging Techniques: Real Time, Joint Annual Meeting ISMRM-ESMRMB, Milano 2014, In Proc. Intl. Soc. Mag. Reson. Med 22: 412 (2014)
• Real-time MRI of Speaking, USC Speech MRI Summit, Los Angeles 2014
• Compressed Sensing and Parallel Imaging - Iterative Reconstruction in Magnetic Resonance Imaging, Advanced Bioimaging Technologies Conference, Krakow 2013
• Compressed Sensing, ESMRMB Lectures of MR - Inverse Imaging, Freiburg 2013
• Software Toolbox for Compressed Sensing and Parallel Imaging, Data Processing Workshop, University of California, San Francisco 2013
• Frontiers in Realtime MRI, 3rd International Workshop on Accelerated Magnetic Resonance Imaging, Freiburg 2012
• Nonlinear Inverse Reconstruction in Parallel Magnetic Resonance Imaging, VA Medical Center, San Francisco 2012
• Real-time Magnetic Resonance Imaging at High Temporal Resolution, VI Krakow-Winnipeg Conference on Advanced Bioimaging Technologies, Krakow 2011
• Nonlinear Inverse Reconstruction in Parallel Magnetic Resonance Imaging, Net/Comm/DSP Seminar, University of California, Berkeley 2011
• Inverse Reconstruction Techniques in Magnetic Resonance Imaging, 43rd Polish NMR Seminar, Krakow 2010
• Nonlinear Reconstruction Methods for Magnetic Resonance Imaging, Workshop on Novel Reconstruction Strategies in NMR and MRI, Göttingen 2010
• Simultane Schätzung von Spulensensitivitäten und Bildinhalt in der parallelen MRT - Bildrekonstruktion mit einer nichtlinearen Regularisierungsmethode, Bruker BioSpin MRI GmbH, Ettlingen 2009
• Nonlinear Reconstruction Methods for Magnetic Resonance Imaging, Colloquium, SFB Research Center: Mathematical Optimization and Applications in Biomedical Sciences, Graz 2008
• Autocalibrating Parallel MRI as Nonlinear Inverse Problem, Seminar, Research Training Group 1023, Institute for Numerical and Applied Mathematics, University of Göttingen, Göttingen 2007

Other Contributions

• H. Christian M. Holme, Sebastian Rosenzweig, and Martin Uecker. Phase-constrained Magnetic Resonance Imaging as a Nonlinear Inverse Problem with a Rank Penalty. SIAM Conference on Imaging Science, Bologna 2018, Book of Abstracts, p. 163, Poster Abstract 14
• Christina Unterberg-Buchwald, Christian O Ritter, Verena Reupke, Robin N Wilke (presenting author), Christine Stadelmann-Nessler, Michael Steinmetz, Andreas Schuster, Joachim Lotz, Martin Uecker, Targeted Endomyocardial Biopsy Guided by Real-Time Magnetic Resonance Imaging, 1st DZHK Conference on Translational Medicine, Berlin 2017
• Christina Unterberg-Buchwald, Christian O Ritter, Verena Reupke, Robin N Wilke, Christine Stadelmann-Nessler, Andreas Schuster, Michael Steinmetz, Joachim Lotz, Martin Uecker, Targeted endomyocardial biopsy guided by realtime magnetic resonance imaging, 11th Interventional MRI Symposium, Baltimore 2016
• Jonathan I Tamir, Frank Ong, Joseph Y Cheng, Martin Uecker, and Michael Lustig, Generalized Magnetic Resonance Image Reconstruction using The Berkeley Advanced Reconstruction Toolbox, ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona 2016
• Jonathan I Tamir, Martin Uecker, Shreyas Vasanawala, and Michael Lustig, T2 Shuffling with Partial Fourier Acquisition and Reconstruction, ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona 2016 Poster Award: 1st Prize
• Sebastian Schätz and Martin Uecker, From Image to Video: Real-time Medical Imaging with MRI, GPU Technology Conference, S3236, San Jose 2013
• Martin Uecker, Patrick Virtue, Frank Ong, Mark J. Murphy, Marcus T. Alley, Shreyas S. Vasanawala, Michael Lustig, Software Toolbox and Programming Library for Compressed Sensing and Parallel Imaging, ISMRM Workshop on Data Sampling and Image Reconstruction, Sedona 2013 [source code]
• Martin Uecker and Michael Lustig, Making SENSE of Chemical Shift: Separating Species in Single-Shot EPI using Multiple Coils, ISMRM Scientific Workshop: Fat-Water Separation: Insights, Applications & Progress in MRI, Long Beach 2012
• Markus F. Untenberger, Martin Uecker, Dirk Voit, and Jens Frahm, Evaluation of Water-Fat Separation Methods for Real-Time MRI, ISMRM Scientific Workshop: Fat-Water Separation: Insights, Applications & Progress in MRI, Long Beach 2012
• Kai Tobias Block, Martin Uecker, Shuo Zhang, Li Feng, Hersh Chandarana, Ricardo Otazo, Iterative Reconstruction Techniques for Faster Scan Speed in Magnetic Resonance Imaging, TOPIM, Les Houches 2012 (invited talk)
• Kai Tobias Block, Martin Uecker, and Jens Frahm, Iterative Reconstruction Concepts for Magnetic Resonance Imaging, Workshop of the SFB Research Center Mathematical Optimization and Applications in Biomedical Sciences: Imaging with Modulated/Incomplete Data, Graz 2010 (invited talk)
• Carola Schönlieb, Martin Uecker, and Thorsten Hohage, Domain Decomposition for Total Variation Regularized Parallel MRI, Workshop on Novel Reconstruction Strategies in NMR and MRI, Göttingen 2010 (invited talk)
• Tilman J. Sumpf, Martin Uecker, Susann Boretius, and Jens Frahm, Model-based Nonlinear Inverse Reconstruction for T2 Mapping Using Highly Undersampled Spin-Echo MRI, Workshop on Novel Reconstruction Strategies in NMR and MRI, Göttingen 2010
• Martin Uecker, Shuo Zhang, and Jens Frahm, Real-time MRI with Nonlinear Inverse Reconstruction, Workshop of the SFB Research Center Mathematical Optimization and Applications in Biomedical Sciences: Imaging with Modulated/Incomplete Data, Graz 2010
• Julien Sénégas, Holger Eggers, and Martin Uecker, Noise amplification in iterative joint estimation algorithms for parallel MRI, ISMRM Third International Workshop on Parallel MRI, Santa Cruz 2009
• Kai Tobias Block, Martin Uecker, and Jens Frahm, Iterative Image Reconstruction of Undersampled Radial MRI Data from Multiple Coils, ISMRM Workshop on Non-Cartesian MRI, Sedona 2007, Workshop Syllabus: Poster 41 (2007)