Fig 1: Graphical impression of the embedding process (Reaction Center in a DOPC bilayer).
Also in highly curved bilayers, proteins can be inserted efficiently, as illustrated by the vesicle system.
Fig 2: Beta Barrel Platform inserted in an small micelle.
We tried g_membed on several test systems. You can download the
topology file of
a Beta-barrel overlapping a popc membrane and spc water system, to try it yourself.
A short manual is given in the help option of g_membed itself. For a more extensive manual see the appendix of our paper.